» Articles » PMID: 20232926

Electrochemical DNA Detection Via Exonuclease and Target-catalyzed Transformation of Surface-bound Probes

Overview
Journal Langmuir
Specialty Chemistry
Date 2010 Mar 18
PMID 20232926
Citations 3
Authors
Affiliations
Soon will be listed here.
Abstract

We report a single-step, single-reagent, label-free, isothermal electrochemical DNA sensor based on the phenomenon of target recycling. The sensor exploits strand-specific exonuclease activity to achieve the selective enzymatic digestion of target/probe duplexes. This results in a permanent change in the probe structure that yields an increased faradaic current and liberates the intact target molecule to interact with additional detection probes to achieve further signal amplification. Using this architecture, we achieve an improved detection limit in comparison to hybridization-based sensors without amplification. We also demonstrate a 16-fold signal amplification factor at low target concentrations. Combined with the advantages of electrochemical detection and its ready integration with microelectronics, our approach may represent a promising path toward direct DNA detection at the point of care.

Citing Articles

Nucleic Acid Based Testing (NABing): A Game Changer Technology for Public Health.

Khera H, Mishra R Mol Biotechnol. 2023; 66(9):2168-2200.

PMID: 37695473 DOI: 10.1007/s12033-023-00870-4.


Detection of Epidermal Growth Factor Receptor Gene Status via a DNA Electrochemical Biosensor Based on Lambda Exonuclease-assisted Signal Amplification.

Weng X, Xu X, Huang P, Liu Z, Liu A, Chen W Anal Sci. 2019; 36(6):697-701.

PMID: 31866610 DOI: 10.2116/analsci.19P422.


Electrochemical DNA hybridization sensors based on conducting polymers.

Rahman M, Li X, Siraj Lopa N, Ahn S, Lee J Sensors (Basel). 2015; 15(2):3801-29.

PMID: 25664436 PMC: 4367386. DOI: 10.3390/s150203801.

References
1.
Liao J, Mastali M, Gau V, Suchard M, Moller A, Bruckner D . Use of electrochemical DNA biosensors for rapid molecular identification of uropathogens in clinical urine specimens. J Clin Microbiol. 2006; 44(2):561-70. PMC: 1392664. DOI: 10.1128/JCM.44.2.561-570.2006. View

2.
Graf N, Goritz M, Kramer R . A metal-ion-releasing probe for DNA detection by catalytic signal amplification. Angew Chem Int Ed Engl. 2006; 45(24):4013-5. DOI: 10.1002/anie.200504319. View

3.
Lee J, Cheong K, Huh N, Kim S, Choi J, Ko C . Microchip-based one step DNA extraction and real-time PCR in one chamber for rapid pathogen identification. Lab Chip. 2006; 6(7):886-95. DOI: 10.1039/b515876a. View

4.
Gao Y, Wolf L, Georgiadis R . Secondary structure effects on DNA hybridization kinetics: a solution versus surface comparison. Nucleic Acids Res. 2006; 34(11):3370-7. PMC: 1488884. DOI: 10.1093/nar/gkl422. View

5.
Lubin A, Lai R, Baker B, Heeger A, Plaxco K . Sequence-specific, electronic detection of oligonucleotides in blood, soil, and foodstuffs with the reagentless, reusable E-DNA sensor. Anal Chem. 2006; 78(16):5671-7. DOI: 10.1021/ac0601819. View