Wethington D, Mukherjee S, Das J
Quant Biol. 2023; 11(1):59-71.
PMID: 37123637
PMC: 10134772.
DOI: 10.15302/j-qb-022-0308.
Rohrs J, Wang P, Finley S
JCO Clin Cancer Inform. 2019; 3:1-8.
PMID: 30689404
PMC: 6593125.
DOI: 10.1200/CCI.18.00057.
Arulraj T, Barik D
PLoS One. 2018; 13(10):e0206232.
PMID: 30356330
PMC: 6200280.
DOI: 10.1371/journal.pone.0206232.
Eftimie R, Gillard J, Cantrell D
Bull Math Biol. 2016; 78(10):2091-2134.
PMID: 27714570
PMC: 5069344.
DOI: 10.1007/s11538-016-0214-9.
Castro M, Lythe G, Molina-Paris C, Ribeiro R
Interface Focus. 2016; 6(2):20150093.
PMID: 27051512
PMC: 4759751.
DOI: 10.1098/rsfs.2015.0093.
HIV-1 Virion Production from Single Inducible Proviruses following T-Cell Activation Ex Vivo.
Bui J, Mellors J, Cillo A
J Virol. 2015; 90(3):1673-6.
PMID: 26559835
PMC: 4719601.
DOI: 10.1128/JVI.02520-15.
Designing and Interpreting Limiting Dilution Assays: General Principles and Applications to the Latent Reservoir for Human Immunodeficiency Virus-1.
Rosenbloom D, Elliott O, Hill A, Henrich T, Siliciano J, Siliciano R
Open Forum Infect Dis. 2015; 2(4):ofv123.
PMID: 26478893
PMC: 4602119.
DOI: 10.1093/ofid/ofv123.
The pool of preactivated Lck in the initiation of T-cell signaling: a critical re-evaluation of the Lck standby model.
Ballek O, Valecka J, Manning J, Filipp D
Immunol Cell Biol. 2014; 93(4):384-95.
PMID: 25420722
DOI: 10.1038/icb.2014.100.
Signal transduction: From the atomic age to the post-genomic era.
Thorner J, Hunter T, Cantley L, Sever R
Cold Spring Harb Perspect Biol. 2014; 6(12):a022913.
PMID: 25359498
PMC: 4292159.
DOI: 10.1101/cshperspect.a022913.
Modeling the T cell immune response: a fascinating challenge.
Morel P, Faeder J, Hawse W, Miskov-Zivanov N
J Pharmacokinet Pharmacodyn. 2014; 41(5):401-13.
PMID: 25155903
PMC: 4210366.
DOI: 10.1007/s10928-014-9376-y.
Modelling biological behaviours with the unified modelling language: an immunological case study and critique.
Read M, Andrews P, Timmis J, Kumar V
J R Soc Interface. 2014; 11(99).
PMID: 25142524
PMC: 4233755.
DOI: 10.1098/rsif.2014.0704.
Changing face of vaccination in immunocompromised hosts.
OShea D, Widmer L, Stelling J, Egli A
Curr Infect Dis Rep. 2014; 16(9):420.
PMID: 24992978
DOI: 10.1007/s11908-014-0420-2.
In vitro membrane reconstitution of the T-cell receptor proximal signaling network.
Hui E, Vale R
Nat Struct Mol Biol. 2014; 21(2):133-42.
PMID: 24463463
PMC: 4062301.
DOI: 10.1038/nsmb.2762.
Replication-competent noninduced proviruses in the latent reservoir increase barrier to HIV-1 cure.
Ho Y, Shan L, Hosmane N, Wang J, Laskey S, Rosenbloom D
Cell. 2013; 155(3):540-51.
PMID: 24243014
PMC: 3896327.
DOI: 10.1016/j.cell.2013.09.020.
The duration of T cell stimulation is a critical determinant of cell fate and plasticity.
Miskov-Zivanov N, Turner M, Kane L, Morel P, Faeder J
Sci Signal. 2013; 6(300):ra97.
PMID: 24194584
PMC: 4074924.
DOI: 10.1126/scisignal.2004217.
Mathematical modelling and computational study of two-dimensional and three-dimensional dynamics of receptor-ligand interactions in signalling response mechanisms.
Garcia-Penarrubia P, Galvez J, Galvez J
J Math Biol. 2013; 69(3):553-82.
PMID: 23893005
DOI: 10.1007/s00285-013-0712-4.
Biochemical heterogeneity and developmental varieties in T-cell leukemia.
Chakraborty A, Roose J
Cell Cycle. 2013; 12(10):1480-1.
PMID: 23652920
PMC: 3680523.
DOI: 10.4161/cc.24858.
Pairing experimentation and computational modeling to understand the role of tissue inducer cells in the development of lymphoid organs.
Alden K, Timmis J, Andrews P, Veiga-Fernandes H, Coles M
Front Immunol. 2012; 3:172.
PMID: 22826707
PMC: 3399454.
DOI: 10.3389/fimmu.2012.00172.
A stochastic T cell response criterion.
Currie J, Castro M, Lythe G, Palmer E, Molina-Paris C
J R Soc Interface. 2012; 9(76):2856-70.
PMID: 22745227
PMC: 3479899.
DOI: 10.1098/rsif.2012.0205.
Lck, Membrane Microdomains, and TCR Triggering Machinery: Defining the New Rules of Engagement.
Filipp D, Ballek O, Manning J
Front Immunol. 2012; 3:155.
PMID: 22701458
PMC: 3372939.
DOI: 10.3389/fimmu.2012.00155.