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Biochemical Networks: the Evolution of Gene Annotation

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Journal Nat Chem Biol
Date 2009 Dec 18
PMID 20016491
Citations 3
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References
1.
Zheng Y, Szustakowski J, Fortnow L, Roberts R, Kasif S . Computational identification of operons in microbial genomes. Genome Res. 2002; 12(8):1221-30. PMC: 186635. DOI: 10.1101/gr.200602. View

2.
Klimke W, Agarwala R, Badretdin A, Chetvernin S, Ciufo S, Fedorov B . The National Center for Biotechnology Information's Protein Clusters Database. Nucleic Acids Res. 2008; 37(Database issue):D216-23. PMC: 2686591. DOI: 10.1093/nar/gkn734. View

3.
Godzik A, Jambon M, Friedberg I . Computational protein function prediction: are we making progress?. Cell Mol Life Sci. 2007; 64(19-20):2505-11. PMC: 11136138. DOI: 10.1007/s00018-007-7211-y. View

4.
Finn R, Tate J, Mistry J, Coggill P, Sammut S, Hotz H . The Pfam protein families database. Nucleic Acids Res. 2007; 36(Database issue):D281-8. PMC: 2238907. DOI: 10.1093/nar/gkm960. View

5.
Roberts R . Identifying protein function--a call for community action. PLoS Biol. 2004; 2(3):E42. PMC: 368155. DOI: 10.1371/journal.pbio.0020042. View