» Articles » PMID: 19754046

Theoretical Analysis of Kinetic Isotope Effects on Proton Transfer Reactions Between Substituted Alpha-methoxystyrenes and Substituted Acetic Acids

Overview
Journal J Am Chem Soc
Specialty Chemistry
Date 2009 Sep 17
PMID 19754046
Citations 10
Authors
Affiliations
Soon will be listed here.
Abstract

Primary kinetic isotope effects (KIEs) on a series of carboxylic acid-catalyzed protonation reactions of aryl-substituted alpha-methoxystyrenes (X-1) to form oxocarbenium ions have been computed using the second-order Kleinert variational perturbation theory (KP2) in the framework of Feynman path integrals (PI) along with the potential energy surface obtained at the B3LYP/6-31+G(d,p) level. Good agreement with the experimental data was obtained, demonstrating that this novel computational approach for computing KIEs of organic reactions is a viable alternative to the traditional method employing Bigeleisen equation and harmonic vibrational frequencies. Although tunneling makes relatively small contributions to the lowering of the free energy barriers for the carboxylic acid catalyzed protonation reaction, it is necessary to include tunneling contributions to obtain quantitative estimates of the KIEs. Consideration of anharmonicity can further improve the calculated KIEs for the protonation of substituted alpha-methoxystyrenes by chloroacetic acid, but for the reactions of the parent and 4-NO(2) substituted alpha-methoxystyrene with substituted carboxylic acids, the correction of anharmonicity overestimates the computed KIEs for strong acid catalysts. In agreement with experimental findings, the largest KIEs are found in nearly ergoneutral reactions, DeltaG(o) approximately 0, where the transition structures are nearly symmetric and the reaction barriers are relatively low. Furthermore, the optimized transition structures are strongly dependent on the free energy for the formation of the carbocation intermediate, that is, the driving force DeltaG(o), along with a good correlation of Hammond shift in the transition state structure.

Citing Articles

Engineering mechanisms of proton-coupled electron transfer to a titanium-substituted polyoxovanadate-alkoxide.

Cooney S, Duggan S, Walls M, Gibson N, Mayer J, Miro P Chem Sci. 2025; 16(6):2886-2897.

PMID: 39822902 PMC: 11733765. DOI: 10.1039/d4sc06468b.


Estimation of frequency factors for the calculation of kinetic isotope effects from classical and path integral free energy simulations.

Giese T, York D J Chem Phys. 2023; 158(17).

PMID: 37125722 PMC: 10154067. DOI: 10.1063/5.0147218.


Altered Mechanisms for Acid-Catalyzed RNA Cleavage and Isomerization Reactions Models.

Xu Y, Harris M, York D, Wong K J Chem Theory Comput. 2023; 19(4):1322-1332.

PMID: 36753428 PMC: 10069163. DOI: 10.1021/acs.jctc.2c01277.


A reevaluation of the origin of the rate acceleration for enzyme-catalyzed hydride transfer.

Reyes A, Amyes T, Richard J Org Biomol Chem. 2017; 15(42):8856-8866.

PMID: 28956050 PMC: 5664202. DOI: 10.1039/c7ob01652b.


Probing Origin of Binding Difference of inhibitors to MDM2 and MDMX by Polarizable Molecular Dynamics Simulation and QM/MM-GBSA Calculation.

Chen J, Wang J, Zhang Q, Chen K, Zhu W Sci Rep. 2015; 5:17421.

PMID: 26616018 PMC: 4663504. DOI: 10.1038/srep17421.


References
1.
Wendt , SCHULZ , Corey , Liu . Enzyme Mechanisms for Polycyclic Triterpene Formation. Angew Chem Int Ed Engl. 2000; 39(16):2812-2833. View

2.
Jarret R, Saunders M . Use of various nuclei as probes in a new NMR method for obtaining proton/deuteron fractionation data. J Am Chem Soc. 2012; 108(24):7549-53. DOI: 10.1021/ja00284a018. View

3.
Gillan . Quantum simulation of hydrogen in metals. Phys Rev Lett. 1987; 58(6):563-566. DOI: 10.1103/PhysRevLett.58.563. View

4.
Lee , Yang , PARR . Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. Phys Rev B Condens Matter. 1988; 37(2):785-789. DOI: 10.1103/physrevb.37.785. View

5.
Rajamani R, Gao J . Balancing kinetic and thermodynamic control: the mechanism of carbocation cyclization by squalene cyclase. J Am Chem Soc. 2003; 125(42):12768-81. DOI: 10.1021/ja0371799. View