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The Expanding World of Methylotrophic Metabolism

Overview
Publisher Annual Reviews
Specialty Microbiology
Date 2009 Jun 12
PMID 19514844
Citations 167
Authors
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Abstract

In the past few years, the field of methylotrophy has undergone a significant transformation in terms of discovery of novel types of methylotrophs, novel modes of methylotrophy, and novel metabolic pathways. This time has also been marked by the resolution of long-standing questions regarding methylotrophy and the challenge of long-standing dogmas. This chapter is not intended to provide a comprehensive review of metabolism of methylotrophic bacteria. Instead we focus on significant recent discoveries that are both refining and transforming the current understanding of methylotrophy as a metabolic phenomenon. We also review new directions in methylotroph ecology that improve our understanding of the role of methylotrophy in global biogeochemical processes, along with an outlook for the future challenges in the field.

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References
1.
Kao W, Chen Y, Yi E, Lee H, Tian Q, Wu K . Quantitative proteomic analysis of metabolic regulation by copper ions in Methylococcus capsulatus (Bath). J Biol Chem. 2004; 279(49):51554-60. DOI: 10.1074/jbc.M408013200. View

2.
Vigliotta G, Nutricati E, Carata E, Tredici S, De Stefano M, Pontieri P . Clonothrix fusca Roze 1896, a filamentous, sheathed, methanotrophic gamma-proteobacterium. Appl Environ Microbiol. 2007; 73(11):3556-65. PMC: 1932688. DOI: 10.1128/AEM.02678-06. View

3.
Anthony C . The quinoprotein dehydrogenases for methanol and glucose. Arch Biochem Biophys. 2004; 428(1):2-9. DOI: 10.1016/j.abb.2004.03.038. View

4.
Hristova K, Schmidt R, Chakicherla A, Legler T, Wu J, Chain P . Comparative transcriptome analysis of Methylibium petroleiphilum PM1 exposed to the fuel oxygenates methyl tert-butyl ether and ethanol. Appl Environ Microbiol. 2007; 73(22):7347-57. PMC: 2168209. DOI: 10.1128/AEM.01604-07. View

5.
Huse S, Dethlefsen L, Huber J, Welch D, Relman D, Sogin M . Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing. PLoS Genet. 2008; 4(11):e1000255. PMC: 2577301. DOI: 10.1371/journal.pgen.1000255. View