What Have We Learned from the Studies of Two-state Folders, and What Are the Unanswered Questions About Two-state Protein Folding?
Overview
Authors
Affiliations
Small proteins with globular structures often fold by simple all-or-none mechanisms, both in an equilibrium and a kinetic sense, despite the very large number of partly folded conformations available. This type of 'two-state' folding will be discussed in terms of experimental tests, underlying molecular mechanisms, and limits to two-state behavior. Factors that appear to be important for two-state folding include topology (sequence distance of contacts in the native structure), molecular cooperativity and local energy distribution. Because their local stability distributions and cooperativities can be dissected and analyzed separately from topological features, recent studies of the folding of symmetric proteins will be discussed as a means to better understand the origins of two-state folding.
Schiavon A, Saba L, Catucci G, Petiti J, Puglisi S, Borin C Int J Mol Sci. 2023; 24(23).
PMID: 38069023 PMC: 10706292. DOI: 10.3390/ijms242316701.
The Molten Globule, and Two-State vs. Non-Two-State Folding of Globular Proteins.
Kuwajima K Biomolecules. 2020; 10(3).
PMID: 32155758 PMC: 7175247. DOI: 10.3390/biom10030407.
Modulating long-range energetics via helix stabilization: A case study using T4 lysozyme.
Rosemond S, Hamadani K, Cate J, Marqusee S Protein Sci. 2018; 27(12):2084-2093.
PMID: 30284332 PMC: 6237701. DOI: 10.1002/pro.3521.
Heterogeneity in the Folding of Villin Headpiece Subdomain HP36.
Nagarajan S, Xiao S, Raleigh D, Dyer R J Phys Chem B. 2018; 122(49):11640-11648.
PMID: 30118232 PMC: 6395539. DOI: 10.1021/acs.jpcb.8b07683.
Identification and Characterization of an Inside-Out Folding Intermediate of T4 Phage Sliding Clamp.
Singh M, Jain V Biophys J. 2017; 113(8):1738-1749.
PMID: 29045868 PMC: 5647592. DOI: 10.1016/j.bpj.2017.08.043.