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Signal Sequences Activate the Catalytic Switch of SRP RNA

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Journal Science
Specialty Science
Date 2009 Jan 3
PMID 19119234
Citations 47
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Abstract

The signal recognition particle (SRP) recognizes polypeptide chains bearing a signal sequence as they emerge from the ribosome, and then binds its membrane-associated receptor (SR), thereby delivering the ribosome-nascent chain complex to the endoplasmic reticulum in eukaryotic cells and the plasma membrane in prokaryotic cells. SRP RNA catalytically accelerates the interaction of SRP and SR, which stimulates their guanosine triphosphatase (GTPase) activities, leading to dissociation of the complex. We found that although the catalytic activity of SRP RNA appeared to be constitutive, SRP RNA accelerated complex formation only when SRP was bound to a signal sequence. This crucial control step was obscured because a detergent commonly included in the reaction buffer acted as a signal peptide mimic. Thus, SRP RNA is a molecular switch that renders the SRP-SR GTPase engine responsive to signal peptide recruitment, coupling GTP hydrolysis to productive protein targeting.

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References
1.
Keenan R, Freymann D, Walter P, Stroud R . Crystal structure of the signal sequence binding subunit of the signal recognition particle. Cell. 1998; 94(2):181-91. DOI: 10.1016/s0092-8674(00)81418-x. View

2.
von Heijne G . Signal sequences. The limits of variation. J Mol Biol. 1985; 184(1):99-105. DOI: 10.1016/0022-2836(85)90046-4. View

3.
Bornemann T, Jockel J, Rodnina M, Wintermeyer W . Signal sequence-independent membrane targeting of ribosomes containing short nascent peptides within the exit tunnel. Nat Struct Mol Biol. 2008; 15(5):494-9. DOI: 10.1038/nsmb.1402. View

4.
Pape T, Wintermeyer W, Rodnina M . Induced fit in initial selection and proofreading of aminoacyl-tRNA on the ribosome. EMBO J. 1999; 18(13):3800-7. PMC: 1171457. DOI: 10.1093/emboj/18.13.3800. View

5.
Batey R, Rambo R, Lucast L, Rha B, Doudna J . Crystal structure of the ribonucleoprotein core of the signal recognition particle. Science. 2000; 287(5456):1232-9. DOI: 10.1126/science.287.5456.1232. View