Alhabsi A, Butt H, Kirschner G, Blilou I, Mahfouz M
J Exp Bot. 2023; 75(3):802-818.
PMID: 37924151
PMC: 10837019.
DOI: 10.1093/jxb/erad433.
Shi W, Yang J, Chen D, Yin C, Zhang H, Xu X
PLoS Pathog. 2022; 18(12):e1011036.
PMID: 36480554
PMC: 9767378.
DOI: 10.1371/journal.ppat.1011036.
Wang G, Sun P, Sun Z, Zhu J, Yu D, Tang Z
J Fungi (Basel). 2022; 8(10).
PMID: 36294621
PMC: 9605648.
DOI: 10.3390/jof8101056.
Habib E, Mathavarajah S, Dellaire G
Front Genet. 2022; 13:839963.
PMID: 35281802
PMC: 8912934.
DOI: 10.3389/fgene.2022.839963.
Rong S, Buerer L, Rhine C, Wang J, Cygan K, Fairbrother W
Nat Commun. 2020; 11(1):2845.
PMID: 32504065
PMC: 7275064.
DOI: 10.1038/s41467-020-16673-z.
Many rice genes are differentially spliced between roots and shoots but cytokinin has minimal effect on splicing.
Freese N, Estrada A, Blakley I, Duan J, Loraine A
Plant Direct. 2019; 3(5):e00136.
PMID: 31245776
PMC: 6589529.
DOI: 10.1002/pld3.136.
Origin of exon skipping-rich transcriptomes in animals driven by evolution of gene architecture.
Grau-Bove X, Ruiz-Trillo I, Irimia M
Genome Biol. 2018; 19(1):135.
PMID: 30223879
PMC: 6142364.
DOI: 10.1186/s13059-018-1499-9.
Predicting human splicing branchpoints by combining sequence-derived features and multi-label learning methods.
Zhang W, Zhu X, Fu Y, Tsuji J, Weng Z
BMC Bioinformatics. 2017; 18(Suppl 13):464.
PMID: 29219070
PMC: 5773893.
DOI: 10.1186/s12859-017-1875-6.
A heuristic model for computational prediction of human branch point sequence.
Wen J, Wang J, Zhang Q, Guo D
BMC Bioinformatics. 2017; 18(1):459.
PMID: 29065858
PMC: 5655975.
DOI: 10.1186/s12859-017-1864-9.
Dynamics of genomic innovation in the unicellular ancestry of animals.
Grau-Bove X, Torruella G, Donachie S, Suga H, Leonard G, Richards T
Elife. 2017; 6.
PMID: 28726632
PMC: 5560861.
DOI: 10.7554/eLife.26036.
Post-translational modification directs nuclear and hyphal tip localization of Candida albicans mRNA-binding protein Slr1.
Ariyachet C, Beissel C, Li X, Lorrey S, MacKenzie O, Martin P
Mol Microbiol. 2017; 104(3):499-519.
PMID: 28187496
PMC: 5405739.
DOI: 10.1111/mmi.13643.
Prp4 Kinase Grants the License to Splice: Control of Weak Splice Sites during Spliceosome Activation.
Eckert D, Andree N, Razanau A, Zock-Emmenthal S, Lutzelberger M, Plath S
PLoS Genet. 2016; 12(1):e1005768.
PMID: 26730850
PMC: 4701394.
DOI: 10.1371/journal.pgen.1005768.
Determinants of the Usage of Splice-Associated cis-Motifs Predict the Distribution of Human Pathogenic SNPs.
Wu X, Hurst L
Mol Biol Evol. 2015; 33(2):518-29.
PMID: 26545919
PMC: 4866546.
DOI: 10.1093/molbev/msv251.
SR protein kinases promote splicing of nonconsensus introns.
Lipp J, Marvin M, Shokat K, Guthrie C
Nat Struct Mol Biol. 2015; 22(8):611-7.
PMID: 26167880
DOI: 10.1038/nsmb.3057.
Why Selection Might Be Stronger When Populations Are Small: Intron Size and Density Predict within and between-Species Usage of Exonic Splice Associated cis-Motifs.
Wu X, Hurst L
Mol Biol Evol. 2015; 32(7):1847-61.
PMID: 25771198
PMC: 4476162.
DOI: 10.1093/molbev/msv069.
Origin of spliceosomal introns and alternative splicing.
Irimia M, Roy S
Cold Spring Harb Perspect Biol. 2014; 6(6).
PMID: 24890509
PMC: 4031966.
DOI: 10.1101/cshperspect.a016071.
The evolution, impact and properties of exonic splice enhancers.
Fernandez Caceres E, Hurst L
Genome Biol. 2013; 14(12):R143.
PMID: 24359918
PMC: 4054783.
DOI: 10.1186/gb-2013-14-12-r143.
The relationship between gene isoform multiplicity, number of exons and protein divergence.
Morata J, Bejar S, Talavera D, Riera C, Lois S, Mas de Xaxars G
PLoS One. 2013; 8(8):e72742.
PMID: 24023641
PMC: 3758341.
DOI: 10.1371/journal.pone.0072742.
Evidence for deep phylogenetic conservation of exonic splice-related constraints: splice-related skews at exonic ends in the brown alga Ectocarpus are common and resemble those seen in humans.
Wu X, Tronholm A, Fernandez Caceres E, Tovar-Corona J, Chen L, Urrutia A
Genome Biol Evol. 2013; 5(9):1731-45.
PMID: 23902749
PMC: 3787667.
DOI: 10.1093/gbe/evt115.
SR-like RNA-binding protein Slr1 affects Candida albicans filamentation and virulence.
Ariyachet C, Solis N, Liu Y, Prasadarao N, Filler S, McBride A
Infect Immun. 2013; 81(4):1267-76.
PMID: 23381995
PMC: 3639594.
DOI: 10.1128/IAI.00864-12.