» Articles » PMID: 18978023

IMGT, the International ImMunoGeneTics Information System

Abstract

IMGT, the international ImMunoGeneTics information system (http://www.imgt.org), was created in 1989 by Marie-Paule Lefranc, Laboratoire d'ImmunoGénétique Moléculaire LIGM (Université Montpellier 2 and CNRS) at Montpellier, France, in order to standardize and manage the complexity of immunogenetics data. The building of a unique ontology, IMGT-ONTOLOGY, has made IMGT the global reference in immunogenetics and immunoinformatics. IMGT is a high-quality integrated knowledge resource specialized in the immunoglobulins or antibodies, T cell receptors, major histocompatibility complex, of human and other vertebrate species, proteins of the IgSF and MhcSF, and related proteins of the immune systems of any species. IMGT provides a common access to standardized data from genome, proteome, genetics and 3D structures. IMGT consists of five databases (IMGT/LIGM-DB, IMGT/GENE-DB, IMGT/3Dstructure-DB, etc.), fifteen interactive online tools for sequence, genome and 3D structure analysis, and more than 10,000 HTML pages of synthesis and knowledge. IMGT is used in medical research (autoimmune diseases, infectious diseases, AIDS, leukemias, lymphomas and myelomas), veterinary research, biotechnology related to antibody engineering (phage displays, combinatorial libraries, chimeric, humanized and human antibodies), diagnostics (clonalities, detection and follow-up of residual diseases) and therapeutical approaches (graft, immunotherapy, vaccinology). IMGT is freely available at http://www.imgt.org.

Citing Articles

Generation of antigen-specific paired chain antibody sequences using large language models.

Wasdin P, Johnson N, Janke A, Held S, Marinov T, Jordaan G bioRxiv. 2025; .

PMID: 40027781 PMC: 11870394. DOI: 10.1101/2024.12.20.629482.


ParaSurf: a surface-based deep learning approach for paratope-antigen interaction prediction.

Papadopoulos A, Axenopoulos A, Iatrou A, Stamatopoulos K, Alvarez F, Daras P Bioinformatics. 2025; 41(2).

PMID: 39921885 PMC: 11855283. DOI: 10.1093/bioinformatics/btaf062.


Structurally convergent antibodies derived from different vaccine strategies target the influenza virus HA anchor epitope with a subset of V3 and V3 genes.

Lin T, Lee C, Fernandez-Quintero M, Ferguson J, Han J, Zhu X Nat Commun. 2025; 16(1):1268.

PMID: 39894881 PMC: 11788443. DOI: 10.1038/s41467-025-56496-4.


Elucidating the Role of the T Cell Receptor Repertoire in Myelodysplastic Neoplasms and Acute Myeloid Leukemia.

Barakos G, Georgoulis V, Koumpis E, Hatzimichael E Diseases. 2025; 13(1).

PMID: 39851483 PMC: 11765071. DOI: 10.3390/diseases13010019.


AntiBinder: utilizing bidirectional attention and hybrid encoding for precise antibody-antigen interaction prediction.

Zhang K, Tao Y, Wang F Brief Bioinform. 2025; 26(1.

PMID: 39831890 PMC: 11744619. DOI: 10.1093/bib/bbaf008.


References
1.
Wain H, Bruford E, Lovering R, Lush M, Wright M, Povey S . Guidelines for human gene nomenclature. Genomics. 2002; 79(4):464-70. DOI: 10.1006/geno.2002.6748. View

2.
Giudicelli V, Chaume D, Lefranc M . IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2004; 33(Database issue):D256-61. PMC: 539964. DOI: 10.1093/nar/gki010. View

3.
Wilming L, Gilbert J, Howe K, Trevanion S, Hubbard T, Harrow J . The vertebrate genome annotation (Vega) database. Nucleic Acids Res. 2007; 36(Database issue):D753-60. PMC: 2238886. DOI: 10.1093/nar/gkm987. View

4.
Lefranc M . WHO-IUIS Nomenclature Subcommittee for immunoglobulins and T cell receptors report August 2007, 13th International Congress of Immunology, Rio de Janeiro, Brazil. Dev Comp Immunol. 2007; 32(5):461-3. DOI: 10.1016/j.dci.2007.09.008. View

5.
Lefranc M, Giudicelli V, Regnier L, Duroux P . IMGT, a system and an ontology that bridge biological and computational spheres in bioinformatics. Brief Bioinform. 2008; 9(4):263-75. DOI: 10.1093/bib/bbn014. View