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A Toolkit for Analysing Large-scale Plant Small RNA Datasets

Overview
Journal Bioinformatics
Specialty Biology
Date 2008 Aug 21
PMID 18713789
Citations 146
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Abstract

Unlabelled: Recent developments in high-throughput sequencing technologies have generated considerable demand for tools to analyse large datasets of small RNA sequences. Here, we describe a suite of web-based tools for processing plant small RNA datasets. Our tools can be used to identify micro RNAs and their targets, compare expression levels in sRNA loci, and find putative trans-acting siRNA loci.

Availability: The tools are freely available for use at http://srna-tools.cmp.uea.ac.uk.

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