Methodologies for Characterizing Phosphoproteins by Mass Spectrometry
Overview
Authors
Affiliations
Posttranslational regulation of proteins via protein phosphorylation is one of the major means of protein regulation. Phosphorylation is a very rapid and reversible method of changing the function of proteins. Detection of phosphorylated proteins and the identification of phosphorylation sites are necessary to molecularly link specific phosphorylated events with change in phosphoprotein function. Mass Spectrometry (MS) has become the methodology of choice for phosphosite identification. Here we review current approaches including sample separation and enrichment techniques (SDS-PAGE, immunoprecipitation, metal-assisted enrichment, strong cation exchange, dendrimer capture), quantitative MS analysis methods (SILAC, iTRAQ, AQUA), and the application of recently developed methods including electron transfer dissociation ionization and "top-down" proteomics to phosphoprotein analysis.
Neuromodulator regulation and emotions: insights from the crosstalk of cell signaling.
Tsuboi D, Nagai T, Yoshimoto J, Kaibuchi K Front Mol Neurosci. 2024; 17:1376762.
PMID: 38516040 PMC: 10954900. DOI: 10.3389/fnmol.2024.1376762.
Bobalova J, Strouhalova D, Bobal P J Agric Food Chem. 2023; 71(41):14825-14837.
PMID: 37792446 PMC: 10591476. DOI: 10.1021/acs.jafc.3c00886.
Deep Learning in Phosphoproteomics: Methods and Application in Cancer Drug Discovery.
Varshney N, Mishra A Proteomes. 2023; 11(2).
PMID: 37218921 PMC: 10204361. DOI: 10.3390/proteomes11020016.
Current Analytical Strategies in Studying Chromatin-Associated-Proteome (Chromatome).
Khan N, Shahid S, Asif A Molecules. 2021; 26(21).
PMID: 34771102 PMC: 8588255. DOI: 10.3390/molecules26216694.
Cell senescence altered the miRNA expression profile in porcine angular aqueous plexus cells.
Tan C, Yang Y, Song M, Cao Z, Sun X, Lei Y Mol Vis. 2020; 26:76-90.
PMID: 32165828 PMC: 7043640.