» Articles » PMID: 17097592

Promotion of Tubulin Assembly by Poorly Soluble Taxol Analogs

Overview
Journal Anal Biochem
Publisher Elsevier
Specialty Biochemistry
Date 2006 Nov 14
PMID 17097592
Citations 8
Authors
Affiliations
Soon will be listed here.
Abstract

Promotion or inhibition of tubulin assembly into microtubules is the standard in vitro assay for evaluating potential antimicrotubule agents. Many agents to be tested are poorly soluble in aqueous solution and require a cosolvent such as dimethyl sulfoxide (DMSO). However, DMSO itself can promote tubulin assembly, and its inclusion in assays for compounds that induce tubulin assembly complicates interpretation of the results. Substituting GDP for GTP in the exchangeable nucleotide binding site of tubulin produces a less active form of the protein, tubulin-GDP. Here it is shown that tubulin-GDP can be assembled into normal microtubules in DMSO concentrations up to 15% (v/v), and polymerization assays performed under these conditions can be compared with assays run under more standard conditions. Assays for measuring the effective concentration of a ligand for promotion of tubulin assembly (EC(50)), measuring the concentration for inhibition of tubulin assembly (IC(50)) by a colchicine site ligand, and measuring tubulin critical concentrations in the presence of poorly soluble taxol derivatives are illustrated.

Citing Articles

Characterization of Ferroptosis-Related Molecular Subtypes with Immune Infiltrations in Neuropathic Pain.

Bi Y, Wang J, Guo Z, Jia K J Pain Res. 2022; 15:3327-3348.

PMID: 36311291 PMC: 9601606. DOI: 10.2147/JPR.S385228.


Microtubules: Evolving roles and critical cellular interactions.

Logan C, Menko A Exp Biol Med (Maywood). 2019; 244(15):1240-1254.

PMID: 31387376 PMC: 6880148. DOI: 10.1177/1535370219867296.


Thermo-Sensitive TRP Channels: Novel Targets for Treating Chemotherapy-Induced Peripheral Pain.

Naziroglu M, Braidy N Front Physiol. 2018; 8:1040.

PMID: 29326595 PMC: 5733463. DOI: 10.3389/fphys.2017.01040.


Dissecting paclitaxel-microtubule association: quantitative assessment of the 2'-OH group.

Sharma S, Lagisetti C, Poliks B, Coates R, Kingston D, Bane S Biochemistry. 2013; 52(13):2328-36.

PMID: 23473345 PMC: 3685414. DOI: 10.1021/bi400014t.


C6-C8 bridged epothilones: consequences of installing a conformational lock at the edge of the macrocycle.

Zhan W, Jiang Y, Sharma S, Brodie P, Bane S, Kingston D Chemistry. 2011; 17(52):14792-804.

PMID: 22127984 PMC: 3248799. DOI: 10.1002/chem.201102630.


References
1.
PENEFSKY H . Preparation of nucleotide-depleted F1 and binding of adenine nucleotides and analogs to the depleted enzyme. Methods Enzymol. 1979; 55:377-80. DOI: 10.1016/0076-6879(79)55048-4. View

2.
Miller M, Roller E, Zhao R, Leece B, Ab O, Baloglu E . Synthesis of taxoids with improved cytotoxicity and solubility for use in tumor-specific delivery. J Med Chem. 2004; 47(20):4802-5. DOI: 10.1021/jm049705s. View

3.
Robinson J, Engelborghs Y . Tubulin polymerization in dimethyl sulfoxide. J Biol Chem. 1982; 257(10):5367-71. View

4.
Williams Jr R, Lee J . Preparation of tubulin from brain. Methods Enzymol. 1982; 85 Pt B:376-85. DOI: 10.1016/0076-6879(82)85038-6. View

5.
Arakawa T, Timasheff S . The mechanism of action of Na glutamate, lysine HCl, and piperazine-N,N'-bis(2-ethanesulfonic acid) in the stabilization of tubulin and microtubule formation. J Biol Chem. 1984; 259(8):4979-86. View