» Articles » PMID: 16959962

A Fungal Family of Transcriptional Regulators: the Zinc Cluster Proteins

Overview
Specialty Microbiology
Date 2006 Sep 9
PMID 16959962
Citations 278
Authors
Affiliations
Soon will be listed here.
Abstract

The trace element zinc is required for proper functioning of a large number of proteins, including various enzymes. However, most zinc-containing proteins are transcription factors capable of binding DNA and are named zinc finger proteins. They form one of the largest families of transcriptional regulators and are categorized into various classes according to zinc-binding motifs. This review focuses on one class of zinc finger proteins called zinc cluster (or binuclear) proteins. Members of this family are exclusively fungal and possess the well-conserved motif CysX(2)CysX(6)CysX(5-12)CysX(2)CysX(6-8)Cys. The cysteine residues bind to two zinc atoms, which coordinate folding of the domain involved in DNA recognition. The first- and best-studied zinc cluster protein is Gal4p, a transcriptional activator of genes involved in the catabolism of galactose in the budding yeast Saccharomyces cerevisiae. Since the discovery of Gal4p, many other zinc cluster proteins have been characterized; they function in a wide range of processes, including primary and secondary metabolism and meiosis. Other roles include regulation of genes involved in the stress response as well as pleiotropic drug resistance, as demonstrated in budding yeast and in human fungal pathogens. With the number of characterized zinc cluster proteins growing rapidly, it is becoming more and more apparent that they are important regulators of fungal physiology.

Citing Articles

Discovery of a novel translation-machinery-associated protein that positively correlates with cellulase production.

Ma K, Zhang P, Zhao J, Qin Y Biotechnol Biofuels Bioprod. 2025; 18(1):20.

PMID: 39987148 PMC: 11847360. DOI: 10.1186/s13068-025-02624-7.


Aspergillus Mycotoxins: The Major Food Contaminants.

Xue M, Qu Z, Moretti A, Logrieco A, Chu H, Zhang Q Adv Sci (Weinh). 2025; 12(9):e2412757.

PMID: 39921319 PMC: 11884562. DOI: 10.1002/advs.202412757.


Optimization of central carbon metabolism by Warburg effect of human cancer cell improves triterpenes biosynthesis in yeast.

Lin X, An T, Fu D, Duan S, Jin H, Wang H Adv Biotechnol (Singap). 2025; 1(4):4.

PMID: 39883335 PMC: 11727583. DOI: 10.1007/s44307-023-00004-6.


Dual RNA-seq reveals transcriptome changes during Fusarium virguliforme-Trichoderma afroharzianum interactions.

Pimentel M, Rocha L, Subedi A, Bond J, Fakhoury A PLoS One. 2025; 20(1):e0310850.

PMID: 39854323 PMC: 11761082. DOI: 10.1371/journal.pone.0310850.


Adaptation of Candida albicans to specific host environments by gain-of-function mutations in transcription factors.

Morschhauser J PLoS Pathog. 2024; 20(11):e1012643.

PMID: 39495716 PMC: 11534201. DOI: 10.1371/journal.ppat.1012643.


References
1.
Williams R, Primig M, Washburn B, Winzeler E, Bellis M, Sarrauste de Menthiere C . The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast. Proc Natl Acad Sci U S A. 2002; 99(21):13431-6. PMC: 129690. DOI: 10.1073/pnas.202495299. View

2.
KIRKPATRICK C, Schimmel P . Detection of leucine-independent DNA site occupancy of the yeast Leu3p transcriptional activator in vivo. Mol Cell Biol. 1995; 15(8):4021-30. PMC: 230641. DOI: 10.1128/MCB.15.8.4021. View

3.
Randez-Gil F, Bojunga N, Proft M, Entian K . Glucose derepression of gluconeogenic enzymes in Saccharomyces cerevisiae correlates with phosphorylation of the gene activator Cat8p. Mol Cell Biol. 1997; 17(5):2502-10. PMC: 232099. DOI: 10.1128/MCB.17.5.2502. View

4.
Karpichev I, SMALL G . Global regulatory functions of Oaf1p and Pip2p (Oaf2p), transcription factors that regulate genes encoding peroxisomal proteins in Saccharomyces cerevisiae. Mol Cell Biol. 1998; 18(11):6560-70. PMC: 109241. DOI: 10.1128/MCB.18.11.6560. View

5.
Watson A, Edmondson D, BONE J, Mukai Y, Yu Y, Du W . Ssn6-Tup1 interacts with class I histone deacetylases required for repression. Genes Dev. 2000; 14(21):2737-44. PMC: 317033. DOI: 10.1101/gad.829100. View