» Articles » PMID: 16767176

Variations in Abundance of 2 Repetitive Sequences in Leymus and Psathyrostachys Species

Overview
Journal Genome
Specialty Genetics
Date 2006 Jun 13
PMID 16767176
Citations 7
Authors
Affiliations
Soon will be listed here.
Abstract

The Ns genome of the genus Psathyrostachys is a component of the polyploid genome in the genus Leymus. Using fluorescence in situ hybridization (FISH), the occurrence and abundance of 2 tandem repetitive sequences from Leymus racemosus (Lam.) Tzvelev, pLrTaiI-1 (TaiI family) and pLrPstI-1 (1 class of 350-bp family), were assayed in 4 species of the genera Psathyrostachys and Leymus. The pLrPstI-1 sequence was absent in all 4 Psathyrostachys species. While P. fragilis and P. huashanica did not have the pLrTaiI-1 sequence, 15 accessions of P. juncea and 2 accessions of P. lanuginosa had pLrTaiI-1 sites ranging in number from 7 to 16 and from 2 to 21, respectively. The numbers of pLrTaiI-1 and pLrPstI-1 sites were 1-24 and 0-30, respectively, in L. ramosus; 2-31 and 5-36 in L. racemosus; 0-4 and 0 in L. mollis; 2-9 and 24-27 in L. secalinus. The FISH assay on pLrTaiI-1 was successfully converted to a sequence-tagged-site polymerase chain reaction (STS-PCR) test using a primer pair designed from the sequence of this repetitive DNA. Seventy-three accessions representing 27 Leymus species were assayed for the abundance of pLrTaiI-1 by STS-PCR. With a few exceptions of uniformity in some accessions, nearly all Leymus species observed were heterogeneous for the abundance of pLrTaiI-1 sequence and no Leymus species was totally devoid of this repetitive sequence. These findings may have significance for the understanding of phylogeny, nature of polyploidy, adaptive ranges, and breeding potential of Leymus species.

Citing Articles

Cytogenetic and Molecular Marker Analyses of a Novel Wheat- 7Ns Disomic Addition Line with Powdery Mildew Resistance.

Tan B, Wang M, Cai L, Li S, Zhu W, Xu L Int J Mol Sci. 2022; 23(18).

PMID: 36142197 PMC: 9499632. DOI: 10.3390/ijms231810285.


Identification of a Wheat- 7Ns Ditelosomic Addition Line Conferring Early Maturation by Cytological Analysis and Newly Developed Molecular and FISH Markers.

Tan B, Zhao L, Li L, Zhang H, Zhu W, Xu L Front Plant Sci. 2021; 12:784001.

PMID: 34956281 PMC: 8695443. DOI: 10.3389/fpls.2021.784001.


Molecular Cytogenetic and Agronomic Characterization of the Similarities and Differences Between Wheat- Trin. and Wheat- Keng 3Ns (3D) Substitution Lines.

Li J, Li J, Cheng X, Zhao L, Yang Z, Wu J Front Plant Sci. 2021; 12:644896.

PMID: 33897735 PMC: 8061751. DOI: 10.3389/fpls.2021.644896.


Efficient anchoring of alien chromosome segments introgressed into bread wheat by new Leymus racemosus genome-based markers.

Edet O, Kim J, Okamoto M, Hanada K, Takeda T, Kishii M BMC Genet. 2018; 19(1):18.

PMID: 29587653 PMC: 5872505. DOI: 10.1186/s12863-018-0603-1.


New molecular markers and cytogenetic probes enable chromosome identification of wheat-Thinopyrum intermedium introgression lines for improving protein and gluten contents.

Li G, Wang H, Lang T, Li J, La S, Yang E Planta. 2016; 244(4):865-76.

PMID: 27290728 DOI: 10.1007/s00425-016-2554-y.