» Articles » PMID: 16597884

Multiple-locus Variable-number Tandem Repeat Analysis of Neisseria Meningitidis Yields Groupings Similar to Those Obtained by Multilocus Sequence Typing

Overview
Specialty Microbiology
Date 2006 Apr 7
PMID 16597884
Citations 26
Authors
Affiliations
Soon will be listed here.
Abstract

We identified many variable-number tandem repeat (VNTR) loci in the genomes of Neisseria meningitidis serogroups A, B, and C and utilized a number of these loci to develop a multiple-locus variable-number tandem repeat analysis (MLVA). Eighty-five N. meningitidis serogroup B and C isolates obtained from Dutch patients with invasive meningococcal disease and seven reference strains were analyzed using MLVA and multilocus sequence typing (MLST). MLVA, based on eight VNTR loci with limited variability in the number of repeats, yielded clustering of the strains similar to that obtained by MLST, with congruence between both methods amounting to 69%. The ability to recognize clonal complexes makes MLVA a valuable high-throughput method to serve as a tool complementary to MLST. Four highly variable VNTR loci were used in a second assay to analyze N. meningitidis serogroup C strains collected during an outbreak of meningococcal disease in The Netherlands. Typing based on the latter VNTR loci enabled differentiation of isolates with identical MLST sequence types and grouped epidemiologically related strains.

Citing Articles

Multilocus variable-number tandem-repeat analysis of Neisseria meningitidis serogroup C in China.

Shan X, Zhou H, Zhang J, Zhu B, Xu L, Xu Z Epidemiol Infect. 2015; 143(14):3001-10.

PMID: 25778999 PMC: 9151049. DOI: 10.1017/S0950268815000473.


Application of multiple-locus variable number tandem repeat analysis to identify outbreak-associated Neisseria meningitides serogroup C sequence type 4821 in China.

Shan X, Zhou H, Zhang J, Zhu B, Xu L, Hu G PLoS One. 2015; 10(1):e0116422.

PMID: 25603352 PMC: 4300189. DOI: 10.1371/journal.pone.0116422.


Genetic diversity of Neisseria meningitidis serogroup C ST-4821 in China based on multiple-locus variable number tandem repeat analysis.

Shan X, Zhang J, Zhou H, Zhu B, Xu L, Shao Z PLoS One. 2014; 9(11):e111866.

PMID: 25375168 PMC: 4222954. DOI: 10.1371/journal.pone.0111866.


Automated extraction of typing information for bacterial pathogens from whole genome sequence data: Neisseria meningitidis as an exemplar.

Jolley K, Maiden M Euro Surveill. 2013; 18(4):20379.

PMID: 23369391 PMC: 3977036. DOI: 10.2807/ese.18.04.20379-en.


Multiclonal origin of macrolide-resistant Mycoplasma pneumoniae isolates as determined by multilocus variable-number tandem-repeat analysis.

Liu Y, Ye X, Zhang H, Xu X, Wang M J Clin Microbiol. 2012; 50(8):2793-5.

PMID: 22649013 PMC: 3421490. DOI: 10.1128/JCM.00678-12.


References
1.
Schouls L, van der Heide H, Vauterin L, Vauterin P, Mooi F . Multiple-locus variable-number tandem repeat analysis of Dutch Bordetella pertussis strains reveals rapid genetic changes with clonal expansion during the late 1990s. J Bacteriol. 2004; 186(16):5496-505. PMC: 490882. DOI: 10.1128/JB.186.16.5496-5505.2004. View

2.
Russell J, Jolley K, Feavers I, Maiden M, Suker J . PorA variable regions of Neisseria meningitidis. Emerg Infect Dis. 2004; 10(4):674-8. PMC: 3323080. DOI: 10.3201/eid1004.030247. View

3.
Goldschneider I, Gotschlich E, Artenstein M . Human immunity to the meningococcus. II. Development of natural immunity. J Exp Med. 1969; 129(6):1327-48. PMC: 2138665. DOI: 10.1084/jem.129.6.1327. View

4.
Holten E . Serotypes of Neisseria meningitidis isolated from patients in Norway during the first six months of 1978. J Clin Microbiol. 1979; 9(2):186-8. PMC: 272987. DOI: 10.1128/jcm.9.2.186-188.1979. View

5.
Caugant D, Kristiansen B, Froholm L, BOVRE K, Selander R . Clonal diversity of Neisseria meningitidis from a population of asymptomatic carriers. Infect Immun. 1988; 56(8):2060-8. PMC: 259523. DOI: 10.1128/iai.56.8.2060-2068.1988. View