» Articles » PMID: 16580733

Klusters, NeuroScope, NDManager: a Free Software Suite for Neurophysiological Data Processing and Visualization

Overview
Specialty Neurology
Date 2006 Apr 4
PMID 16580733
Citations 269
Authors
Affiliations
Soon will be listed here.
Abstract

Recent technological advances now allow for simultaneous recording of large populations of anatomically distributed neurons in behaving animals. The free software package described here was designed to help neurophysiologists process and view recorded data in an efficient and user-friendly manner. This package consists of several well-integrated applications, including NeuroScope (http://neuroscope.sourceforce.net), an advanced viewer for electrophysiological and behavioral data with limited editing capabilities, Klusters (http://klusters.sourceforge.net), a graphical cluster cutting application for manual and semi-automatic spike sorting, NDManager (GPL,see http://www.gnu.org/licenses/gpl.html), an experimental parameter and data processing manager. All of these programs are distributed under the GNU General Public License (GPL, see ), which gives its users legal permission to copy, distribute and/or modify the software. Also included are extensive user manuals and sample data, as well as source code and documentation.

Citing Articles

Major individual and regional variations in unit entrainment by oscillations of different frequencies.

Badawy M, Kim I, Amir A, Herzallah M, Gomez-Alatorre L, Headley D Sci Rep. 2025; 15(1):1772.

PMID: 39800772 PMC: 11725598. DOI: 10.1038/s41598-025-85914-2.


Potassium Release From the Habenular Astrocytes Induces Depressive-Like Behaviors in Mice.

Aizawa H, Matsumata M, Oishi L, Nishimura F, Kasaragod D, Yao X Glia. 2024; 73(4):759-772.

PMID: 39612187 PMC: 11845841. DOI: 10.1002/glia.24647.


Multiscale Cloud-Based Pipeline for Neuronal Electrophysiology Analysis and Visualization.

Geng J, Voitiuk K, Parks D, Robbins A, Spaeth A, Sevetson J bioRxiv. 2024; .

PMID: 39605518 PMC: 11601321. DOI: 10.1101/2024.11.14.623530.


Preconfigured cortico-thalamic neural dynamics constrain movement-associated thalamic activity.

Gonzalez-Pereyra P, Sanchez-Lobato O, Martinez-Montalvo M, Ortega-Romero D, Perez-Diaz C, Merchant H Nat Commun. 2024; 15(1):10185.

PMID: 39582075 PMC: 11586408. DOI: 10.1038/s41467-024-54742-9.


A distinct neuronal ensemble of prelimbic cortex mediates spontaneous pain in rats with peripheral inflammation.

Ma L, Yue L, Liu S, Xu S, Tong J, Sun X Nat Commun. 2024; 15(1):7922.

PMID: 39256428 PMC: 11387830. DOI: 10.1038/s41467-024-52243-3.