» Articles » PMID: 16287116

Assessing Protein Disorder and Induced Folding

Overview
Journal Proteins
Date 2005 Nov 16
PMID 16287116
Citations 177
Authors
Affiliations
Soon will be listed here.
Abstract

Intrinsically disordered proteins (IDPs) defy the structure-function paradigm as they fulfill essential biological functions while lacking well-defined secondary and tertiary structures. Conformational and spectroscopic analyses showed that IDPs do not constitute a uniform family, and can be divided into subfamilies as a function of their residual structure content. Residual intramolecular interactions are thought to facilitate binding to a partner and then induced folding. Comprehensive information about experimental approaches to investigate structural disorder and induced folding is still scarce. We herein provide hints to readily recognize features typical of intrinsic disorder and review the principal techniques to assess structural disorder and induced folding. We describe their theoretical principles and discuss their respective advantages and limitations. Finally, we point out the necessity of using different approaches and show how information can be broadened by the use of multiples techniques.

Citing Articles

Folding-upon-binding pathways of an intrinsically disordered protein from a deep Markov state model.

Sisk T, Robustelli P Proc Natl Acad Sci U S A. 2024; 121(6):e2313360121.

PMID: 38294935 PMC: 10861926. DOI: 10.1073/pnas.2313360121.


Folding-upon-binding pathways of an intrinsically disordered protein from a deep Markov state model.

Sisk T, Robustelli P bioRxiv. 2023; .

PMID: 37546728 PMC: 10401938. DOI: 10.1101/2023.07.21.550103.


Plant dehydrins and dehydrin-like proteins: characterization and participation in abiotic stress response.

Szlachtowska Z, Rurek M Front Plant Sci. 2023; 14:1213188.

PMID: 37484455 PMC: 10358736. DOI: 10.3389/fpls.2023.1213188.


Per Aspera ad Chaos: Vladimir Uversky's Odyssey through the Strange World of Intrinsically Disordered Proteins.

Kulkarni P, Brocca S, Dunker A, Longhi S Biomolecules. 2023; 13(6).

PMID: 37371595 PMC: 10296221. DOI: 10.3390/biom13061015.


ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers.

Redl I, Fisicaro C, Dutton O, Hoffmann F, Henderson L, Owens B NAR Genom Bioinform. 2023; 5(2):lqad041.

PMID: 37138579 PMC: 10150328. DOI: 10.1093/nargab/lqad041.