» Articles » PMID: 16228002

Insights into SARS-CoV Transcription and Replication from the Structure of the Nsp7-nsp8 Hexadecamer

Overview
Date 2005 Oct 18
PMID 16228002
Citations 172
Authors
Affiliations
Soon will be listed here.
Abstract

Coronavirus replication and transcription machinery involves multiple virus-encoded nonstructural proteins (nsp). We report the crystal structure of the hexadecameric nsp7-nsp8 supercomplex from the severe acute respiratory syndrome coronavirus at 2.4-angstroms resolution. nsp8 has a novel 'golf-club' fold with two conformations. The supercomplex is a unique hollow, cylinder-like structure assembled from eight copies of nsp8 and held tightly together by eight copies of nsp7. With an internal diameter of approximately 30 angstroms, the central channel has dimensions and positive electrostatic properties favorable for nucleic acid binding, implying that its role is to confer processivity on RNA-dependent RNA polymerase.

Citing Articles

Transcription Kinetics in the Coronavirus Life Cycle.

Grelewska-Nowotko K, Elhag A, Turowski T Wiley Interdiscip Rev RNA. 2025; 16(1):e70000.

PMID: 39757745 PMC: 11701415. DOI: 10.1002/wrna.70000.


Biochemical characterization of naturally occurring mutations in SARS-CoV-2 RNA-dependent RNA polymerase.

Danda M, Klimesova A, Kuskova K, Dostalkova A, Pagacova A, Prchal J Protein Sci. 2024; 33(9):e5103.

PMID: 39145418 PMC: 11325161. DOI: 10.1002/pro.5103.


NMR Studies of Genomic RNA in 3' Untranslated Region Unveil Pseudoknot Structure that Initiates Viral RNA Replication in SARS-CoV-2.

Ohyama T, Osawa T, Sekine S, Ishii Y JACS Au. 2024; 4(4):1323-1333.

PMID: 38665648 PMC: 11041675. DOI: 10.1021/jacsau.3c00641.


A Comprehensive View on the Protein Functions of Porcine Epidemic Diarrhea Virus.

Li X, Wu Y, Yan Z, Li G, Luo J, Huang S Genes (Basel). 2024; 15(2).

PMID: 38397155 PMC: 10887554. DOI: 10.3390/genes15020165.


Multiple Lines of Evidence Support 199 SARS-CoV-2 Positively Selected Amino Acid Sites.

Ferreira P, Soares R, Lopez-Fernandez H, Vazquez N, Reboiro-Jato M, Vieira C Int J Mol Sci. 2024; 25(4).

PMID: 38397104 PMC: 10889775. DOI: 10.3390/ijms25042428.


References
1.
Kuiken T, Fouchier R, Schutten M, Rimmelzwaan G, van Amerongen G, van Riel D . Newly discovered coronavirus as the primary cause of severe acute respiratory syndrome. Lancet. 2003; 362(9380):263-70. PMC: 7112434. DOI: 10.1016/S0140-6736(03)13967-0. View

2.
Ksiazek T, Erdman D, Goldsmith C, Zaki S, Peret T, Emery S . A novel coronavirus associated with severe acute respiratory syndrome. N Engl J Med. 2003; 348(20):1953-66. DOI: 10.1056/NEJMoa030781. View

3.
Brunger A, Adams P, Clore G, DeLano W, Gros P, Grosse-Kunstleve R . Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr. 1998; 54(Pt 5):905-21. DOI: 10.1107/s0907444998003254. View

4.
Otwinowski Z, Minor W . Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 1997; 276:307-26. DOI: 10.1016/S0076-6879(97)76066-X. View

5.
Krishna T, Kong X, Gary S, Burgers P, Kuriyan J . Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA. Cell. 1994; 79(7):1233-43. DOI: 10.1016/0092-8674(94)90014-0. View