Extending a Spectrin Repeat Unit. I: Linear Force-extension Response
Overview
Affiliations
Nonequilibrium molecular dynamics simulations were used to calculate the elastic properties of a spectrin repeat unit. A contiguous alpha-helical linker was constructed by employing periodic boundary conditions, allowing a novel scheme for evaluating the thermodynamic force as a function of extension. By measuring the force-extension response under small extensions, spectrin was observed to behave primarily as an elastic material with a spring constant of 1700 +/- 100 pN/nm. The implications of this spring constant, in terms of the properties of the spectrin tetramer, are also discussed.
DARC, Glycophorin A, Band 3, and GLUT1 Diffusion in Erythrocytes: Insights into Membrane Complexes.
Kodippili G, Giger K, Putt K, Low P Biophys J. 2020; 119(9):1749-1759.
PMID: 33069269 PMC: 7677130. DOI: 10.1016/j.bpj.2020.09.012.
Mechanical Unfolding of Spectrin Repeats Induces Water-Molecule Ordering.
Moe S, Cembran A Biophys J. 2020; 118(5):1076-1089.
PMID: 32027822 PMC: 7063435. DOI: 10.1016/j.bpj.2020.01.005.
Cytoskeletal control of axon domain assembly and function.
Zhang C, Rasband M Curr Opin Neurobiol. 2016; 39:116-21.
PMID: 27203619 PMC: 4987246. DOI: 10.1016/j.conb.2016.05.001.
Finding the weakest link: exploring integrin-mediated mechanical molecular pathways.
Roca-Cusachs P, Iskratsch T, Sheetz M J Cell Sci. 2012; 125(Pt 13):3025-38.
PMID: 22797926 PMC: 6518164. DOI: 10.1242/jcs.095794.
Protein high-force pulling simulations yield low-force results.
Lichter S, Rafferty B, Flohr Z, Martini A PLoS One. 2012; 7(4):e34781.
PMID: 22529933 PMC: 3329509. DOI: 10.1371/journal.pone.0034781.