Simpleaffy: a BioConductor Package for Affymetrix Quality Control and Data Analysis

Overview

Journal Bioinformatics

Publisher Oxford University Press

Specialty Biology

Date 2005 Aug 4

PMID 16076888

Citations 245

Authors

Claire L Wilson

Crispin J Miller

Affiliations

Soon will be listed here.

Abstract

Unlabelled: Quality Control is a fundamental aspect of successful microarray data analysis. Simpleaffy is a BioConductor package that provides access to a variety of QC metrics for assessing the quality of RNA samples and of the intermediate stages of sample preparation and hybridization. Simpleaffy also offers fast implementations of popular algorithms for generating expression summaries and detection calls.

Availability: Simpleaffy can be downloaded from http://www.bioconductor.org.

Supplementary Information: Additional information can be found on the supplementary website located at http://bioinformatics.picr.man.ac.uk.

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