» Articles » PMID: 15717222

Continuous Enrichment Culture and Molecular Monitoring to Investigate the Microbial Diversity of Thermophiles Inhabiting Deep-sea Hydrothermal Ecosystems

Overview
Journal Curr Microbiol
Specialty Microbiology
Date 2005 Feb 18
PMID 15717222
Citations 7
Authors
Affiliations
Soon will be listed here.
Abstract

The microflora developing during a continuous enrichment culture from a hydrothermal chimney sample was investigated by molecular methods. The culture was performed in a gas-lift bioreactor under anaerobic conditions, at 90 degrees C and pH 6.5, on a complex medium containing sulfur as the terminal electron acceptor. Archaeal and bacterial diversity was studied. Microorganisms affiliated with the genera Pyrococcus, Marinitoga, and Bacillus were detected through DGGE analysis of 16S rDNA. Additional sequences phylogenetically related to Thermococcus and epsilon-Proteobacteria were detected by cloning and sequencing of 16S rDNA from two samples of the enrichment culture. In comparison, the sequences retrieved from cloning analysis from an enrichment culture performed in a flask (batch condition) using the same culture medium showed that only members of the genus Thermococcus were cultivated. Therefore, continuous enrichment culture using the gas-lift bioreactor can be considered as an efficient and improved method for investigating microbial communities originating from deep-sea hydrothermal vents.

Citing Articles

Perspectives on Cultivation Strategies of Archaea.

Sun Y, Liu Y, Pan J, Wang F, Li M Microb Ecol. 2019; 79(3):770-784.

PMID: 31432245 DOI: 10.1007/s00248-019-01422-7.


Biogeochemical insights into microbe-mineral-fluid interactions in hydrothermal chimneys using enrichment culture.

Callac N, Rouxel O, Lesongeur F, Liorzou C, Bollinger C, Pignet P Extremophiles. 2015; 19(3):597-617.

PMID: 25778451 DOI: 10.1007/s00792-015-0742-5.


Genome analysis of deep-sea thermophilic phage D6E.

Wang Y, Zhang X Appl Environ Microbiol. 2010; 76(23):7861-6.

PMID: 20889772 PMC: 2988599. DOI: 10.1128/AEM.01270-10.


Molecular evolution of the hyperthermophilic archaea of the Pyrococcus genus: analysis of adaptation to different environmental conditions.

Gunbin K, Afonnikov D, Kolchanov N BMC Genomics. 2010; 10:639.

PMID: 20042074 PMC: 2816203. DOI: 10.1186/1471-2164-10-639.


Cultivating the uncultured: limits, advances and future challenges.

Alain K, Querellou J Extremophiles. 2009; 13(4):583-94.

PMID: 19548063 DOI: 10.1007/s00792-009-0261-3.


References
1.
Alain K, Marteinsson V, Miroshnichenko M, Prieur D, Birrien J . Marinitoga piezophila sp. nov., a rod-shaped, thermo-piezophilic bacterium isolated under high hydrostatic pressure from a deep-sea hydrothermal vent. Int J Syst Evol Microbiol. 2002; 52(Pt 4):1331-1339. DOI: 10.1099/00207713-52-4-1331. View

2.
Delbes C, Moletta R . Bacterial and archaeal 16S rDNA and 16S rRNA dynamics during an acetate crisis in an anaerobic digestor ecosystem. FEMS Microbiol Ecol. 2001; 35(1):19-26. DOI: 10.1016/s0168-6496(00)00107-0. View

3.
Marteinsson V, Birrien J, Reysenbach A, Vernet M, Marie D, Gambacorta A . Thermococcus barophilus sp. nov., a new barophilic and hyperthermophilic archaeon isolated under high hydrostatic pressure from a deep-sea hydrothermal vent. Int J Syst Bacteriol. 1999; 49 Pt 2:351-9. DOI: 10.1099/00207713-49-2-351. View

4.
LECLERC , Delbes , Moletta , GODON . Single strand conformation polymorphism monitoring of 16S rDNA Archaea during start-up of an anaerobic digester. FEMS Microbiol Ecol. 2001; 34(3):213-220. DOI: 10.1111/j.1574-6941.2001.tb00772.x. View

5.
Delbes C, Moletta R, Godon J . Monitoring of activity dynamics of an anaerobic digester bacterial community using 16S rRNA polymerase chain reaction--single-strand conformation polymorphism analysis. Environ Microbiol. 2001; 2(5):506-15. DOI: 10.1046/j.1462-2920.2000.00132.x. View