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Chromosome Identification and Nomenclature of Sorghum Bicolor

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Journal Genetics
Specialty Genetics
Date 2004 Oct 19
PMID 15489512
Citations 45
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Abstract

Linkage group identities and homologies were determined for metaphase chromosomes of Sorghum bicolor (2n = 20) by FISH of landed BACs. Relative lengths of chromosomes in FISH-karyotyped metaphase spreads of the elite inbred BTx623 were used to estimate the molecular size of each chromosome and to establish a size-based nomenclature for sorghum chromosomes (SBI-01-SBI-10) and linkage groups (LG-01 to LG-10). Lengths of arms were determined to orient linkage groups relative to a standard karyotypic layout (short arms at top). The size-based nomenclature for BTx623 represents a reasonable choice as the standard for a unified chromosome nomenclature for use by the sorghum research community.

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References
1.
Whitkus R, Doebley J, Lee M . Comparative genome mapping of Sorghum and maize. Genetics. 1992; 132(4):1119-30. PMC: 1205233. DOI: 10.1093/genetics/132.4.1119. View

2.
Howell E, Barker G, Jones G, Kearsey M, King G, Kop E . Integration of the cytogenetic and genetic linkage maps of Brassica oleracea. Genetics. 2002; 161(3):1225-34. PMC: 1462174. DOI: 10.1093/genetics/161.3.1225. View

3.
Chittenden L, Schertz K, Lin Y, Wing R, Paterson A . A detailed RFLP map of Sorghum bicolor x S. propinquum, suitable for high-density mapping, suggests ancestral duplication of Sorghum chromosomes or chromosomal segments. Theor Appl Genet. 2013; 87(8):925-33. DOI: 10.1007/BF00225786. View

4.
Sang Y, Liang G . Comparative physical mapping of the 18S-5.8S-26S rDNA in three sorghum species. Genome. 2000; 43(5):918-22. View

5.
Crasta O, Xu W, Rosenow D, Mullet J, Nguyen H . Mapping of post-flowering drought resistance traits in grain sorghum: association between QTLs influencing premature senescence and maturity. Mol Gen Genet. 1999; 262(3):579-88. DOI: 10.1007/s004380051120. View