» Articles » PMID: 15159568

Structural Effects of Radiation Damage and Its Potential for Phasing

Overview
Specialty Chemistry
Date 2004 May 26
PMID 15159568
Citations 27
Authors
Affiliations
Soon will be listed here.
Abstract

A detailed analysis of radiation-damage-induced structural and intensity changes is presented on the model protein thaumatin. Changes in reflection intensities induced by irradiation display a parabolic character. The most pronounced structural changes observed were disulfide-bond breakage and associated main-chain and side-chain movements as well as decarboxylation of aspartate and glutamate residues. The structural changes induced on the sulfur atoms were successfully used to obtain high-quality phase estimates via an RIP procedure. Results obtained with ACORN suggest that the contribution originating from the partial structure may play an important role in phasing even at less than atomic resolution.

Citing Articles

Single-support serial isomorphous replacement phasing.

Foos N, Rizk M, Nanao M Acta Crystallogr D Struct Biol. 2022; 78(Pt 6):716-724.

PMID: 35647919 PMC: 9159287. DOI: 10.1107/S2059798322003977.


Likelihood-based estimation of substructure content from single-wavelength anomalous diffraction (SAD) intensity data.

Hatti K, McCoy A, Read R Acta Crystallogr D Struct Biol. 2021; 77(Pt 7):880-893.

PMID: 34196615 PMC: 8251343. DOI: 10.1107/S2059798321004538.


Non-merohedral twinning: from minerals to proteins.

Sevvana M, Ruf M, Uson I, Sheldrick G, Herbst-Irmer R Acta Crystallogr D Struct Biol. 2019; 75(Pt 12):1040-1050.

PMID: 31793898 PMC: 6889912. DOI: 10.1107/S2059798319010179.


Resolution and dose dependence of radiation damage in biomolecular systems.

Atakisi H, Conger L, Moreau D, Thorne R IUCrJ. 2019; 6(Pt 6):1040-1053.

PMID: 31709060 PMC: 6830208. DOI: 10.1107/S2052252519008777.


X-ray and UV radiation-damage-induced phasing using synchrotron serial crystallography.

Foos N, Seuring C, Schubert R, Burkhardt A, Svensson O, Meents A Acta Crystallogr D Struct Biol. 2018; 74(Pt 4):366-378.

PMID: 29652263 PMC: 5892880. DOI: 10.1107/S2059798318001535.