Zahdeh F, Carmel L
PLoS One. 2019; 14(12):e0225633.
PMID: 31800603
PMC: 6892556.
DOI: 10.1371/journal.pone.0225633.
Davydov I, Salamin N, Robinson-Rechavi M
Mol Biol Evol. 2019; 36(6):1316-1332.
PMID: 30847475
PMC: 6526913.
DOI: 10.1093/molbev/msz048.
Wang L, Xing H, Yuan Y, Wang X, Saeed M, Tao J
PLoS One. 2018; 13(3):e0194372.
PMID: 29584741
PMC: 5870960.
DOI: 10.1371/journal.pone.0194372.
Long H, Sung W, Kucukyildirim S, Williams E, Miller S, Guo W
Nat Ecol Evol. 2018; 2(2):237-240.
PMID: 29292397
PMC: 6855595.
DOI: 10.1038/s41559-017-0425-y.
Stukenbrock E, Dutheil J
Genetics. 2017; 208(3):1209-1229.
PMID: 29263029
PMC: 5844332.
DOI: 10.1534/genetics.117.300502.
Evidence that natural selection on codon usage in Drosophila pseudoobscura varies across codons.
Kliman R
G3 (Bethesda). 2014; 4(4):681-92.
PMID: 24531731
PMC: 4059240.
DOI: 10.1534/g3.114.010488.
Assembly of the genome of the disease vector Aedes aegypti onto a genetic linkage map allows mapping of genes affecting disease transmission.
Juneja P, Osei-Poku J, Ho Y, Ariani C, Palmer W, Pain A
PLoS Negl Trop Dis. 2014; 8(1):e2652.
PMID: 24498447
PMC: 3907309.
DOI: 10.1371/journal.pntd.0002652.
Population genomic analysis of base composition evolution in Drosophila melanogaster.
Poh Y, Ting C, Fu H, Langley C, Begun D
Genome Biol Evol. 2012; 4(12):1245-55.
PMID: 23160062
PMC: 3542573.
DOI: 10.1093/gbe/evs097.
Compositional bias is a major determinant of the distribution pattern and abundance of palindromes in Drosophila melanogaster.
Liu G, Liu J, Zhang B
J Mol Evol. 2012; 75(3-4):130-40.
PMID: 23138634
DOI: 10.1007/s00239-012-9527-y.
The many landscapes of recombination in Drosophila melanogaster.
Comeron J, Ratnappan R, Bailin S
PLoS Genet. 2012; 8(10):e1002905.
PMID: 23071443
PMC: 3469467.
DOI: 10.1371/journal.pgen.1002905.
Evidence for widespread GC-biased gene conversion in eukaryotes.
Pessia E, Popa A, Mousset S, Rezvoy C, Duret L, Marais G
Genome Biol Evol. 2012; 4(7):675-82.
PMID: 22628461
PMC: 5635611.
DOI: 10.1093/gbe/evs052.
Rates of evolution in stress-related genes are associated with habitat preference in two Cardamine lineages.
Ometto L, Li M, Bresadola L, Varotto C
BMC Evol Biol. 2012; 12:7.
PMID: 22257588
PMC: 3398273.
DOI: 10.1186/1471-2148-12-7.
Mutation bias is the driving force of codon usage in the Gallus gallus genome.
Rao Y, Wu G, Wang Z, Chai X, Nie Q, Zhang X
DNA Res. 2011; 18(6):499-512.
PMID: 22039174
PMC: 3223081.
DOI: 10.1093/dnares/dsr035.
Quantifying the variation in the effective population size within a genome.
Gossmann T, Woolfit M, Eyre-Walker A
Genetics. 2011; 189(4):1389-402.
PMID: 21954163
PMC: 3241429.
DOI: 10.1534/genetics.111.132654.
Substitution patterns are GC-biased in divergent sequences across the metazoans.
Capra J, Pollard K
Genome Biol Evol. 2011; 3:516-27.
PMID: 21670083
PMC: 3138425.
DOI: 10.1093/gbe/evr051.
The surprising negative correlation of gene length and optimal codon use--disentangling translational selection from GC-biased gene conversion in yeast.
Stoletzki N
BMC Evol Biol. 2011; 11:93.
PMID: 21481245
PMC: 3096941.
DOI: 10.1186/1471-2148-11-93.
Support for multiple classes of local expression clusters in Drosophila melanogaster, but no evidence for gene order conservation.
Weber C, Hurst L
Genome Biol. 2011; 12(3):R23.
PMID: 21414197
PMC: 3129673.
DOI: 10.1186/gb-2011-12-3-r23.
Intronic AT skew is a defendable proxy for germline transcription but does not predict crossing-over or protein evolution rates in Drosophila melanogaster.
Weber C, Hurst L
J Mol Evol. 2010; 71(5-6):415-26.
PMID: 20938653
DOI: 10.1007/s00239-010-9395-2.
Surprising fitness consequences of GC-biased gene conversion: I. Mutation load and inbreeding depression.
Glemin S
Genetics. 2010; 185(3):939-59.
PMID: 20421602
PMC: 2907210.
DOI: 10.1534/genetics.110.116368.
Studying patterns of recent evolution at synonymous sites and intronic sites in Drosophila melanogaster.
Zeng K, Charlesworth B
J Mol Evol. 2009; 70(1):116-28.
PMID: 20041239
DOI: 10.1007/s00239-009-9314-6.
