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Gramene: a Resource for Comparative Grass Genomics

Overview
Journal Nucleic Acids Res
Publisher Oxford University Press
Specialty Biochemistry
Date 2001 Dec 26
PMID 11752266
Citations 75
Authors
Doreen Ware
Pankaj Jaiswal
Junjian Ni
Xiaokang Pan
Kuan Chang
Kenneth Clark
Leonid Teytelman
Steve Schmidt
Wei Zhao
Samuel Cartinhour
Susan McCouch
Lincoln Stein
Affiliations
Soon will be listed here.
Abstract

Gramene (http://www.gramene.org) is a comparative genome mapping database for grasses and a community resource for rice. Rice, in addition to being an economically important crop, is also a model monocot for understanding other agronomically important grass genomes. Gramene replaces the existing AceDB database 'RiceGenes' with a relational database based on Oracle. Gramene provides curated and integrative information about maps, sequence, genes, genetic markers, mutants, QTLs, controlled vocabularies and publications. Its aims are to use the rice genetic, physical and sequence maps as fundamental organizing units, to provide a common denominator for moving from one crop grass to another and is to serve as a portal for interconnecting with other web-based crop grass resources. This paper describes the initial steps we have taken towards realizing these goals.

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