Haque M, Barman D, Rahman A, Hossain M, Ghosh S, Nahar M
Microorganisms. 2023; 11(12).
PMID: 38138001
PMC: 10745351.
DOI: 10.3390/microorganisms11122857.
Maurer J, Albrecht C, Herbert P, Heussman D, Chang A, von Hippel P
J Phys Chem B. 2023; 127(50):10730-10748.
PMID: 38060691
PMC: 10754251.
DOI: 10.1021/acs.jpcb.3c06463.
Becker R, Hub J
Commun Biol. 2023; 6(1):379.
PMID: 37029280
PMC: 10082070.
DOI: 10.1038/s42003-023-04751-z.
Feliciello I, dermic E, Malovic H, Ivankovic S, Zahradka D, Ljubic S
Int J Mol Sci. 2022; 23(18).
PMID: 36142827
PMC: 9505508.
DOI: 10.3390/ijms231810917.
Cao X, Liu K, Yan S, Li S, Li Y, Jin T
Biophys J. 2022; 121(24):4900-4908.
PMID: 35923103
PMC: 9808545.
DOI: 10.1016/j.bpj.2022.07.030.
OB-fold Families of Genome Guardians: A Universal Theme Constructed From the Small β-barrel Building Block.
Bianco P
Front Mol Biosci. 2022; 9:784451.
PMID: 35223988
PMC: 8881015.
DOI: 10.3389/fmolb.2022.784451.
Mechanisms of hexameric helicases.
Fernandez A, Berger J
Crit Rev Biochem Mol Biol. 2021; 56(6):621-639.
PMID: 34404299
PMC: 9869668.
DOI: 10.1080/10409238.2021.1954597.
The mechanism of action of the SSB interactome reveals it is the first OB-fold family of genome guardians in prokaryotes.
Bianco P
Protein Sci. 2021; 30(9):1757-1775.
PMID: 34089559
PMC: 8376408.
DOI: 10.1002/pro.4140.
Interplay between Position-Dependent Codon Usage Bias and Hydrogen Bonding at the 5' End of ORFeomes.
Villada J, Duran M, Lee P
mSystems. 2020; 5(4).
PMID: 32788408
PMC: 7426154.
DOI: 10.1128/mSystems.00613-20.
Super-resolution imaging reveals changes in Escherichia coli SSB localization in response to DNA damage.
Zhao T, Liu Y, Wang Z, He R, Zhang J, Xu F
Genes Cells. 2019; 24(12):814-826.
PMID: 31638317
PMC: 7065570.
DOI: 10.1111/gtc.12729.
Processivity, Velocity, and Universal Characteristics of Nucleic Acid Unwinding by Helicases.
Chakrabarti S, Jarzynski C, Thirumalai D
Biophys J. 2019; 117(5):867-879.
PMID: 31400912
PMC: 6731385.
DOI: 10.1016/j.bpj.2019.07.021.
The 2B subdomain of Rep helicase links translocation along DNA with protein displacement.
Bruning J, Howard J, Myka K, Dillingham M, McGlynn P
Nucleic Acids Res. 2018; 46(17):8917-8925.
PMID: 30060236
PMC: 6158625.
DOI: 10.1093/nar/gky673.
Dynamics of E. coli single stranded DNA binding (SSB) protein-DNA complexes.
Antony E, Lohman T
Semin Cell Dev Biol. 2018; 86:102-111.
PMID: 29588158
PMC: 6165710.
DOI: 10.1016/j.semcdb.2018.03.017.
A mechanistic study of helicases with magnetic traps.
Hodeib S, Raj S, Manosas M, Zhang W, Bagchi D, Ducos B
Protein Sci. 2017; 26(7):1314-1336.
PMID: 28474797
PMC: 5477542.
DOI: 10.1002/pro.3187.
Single-molecule FRET studies of the cooperative and non-cooperative binding kinetics of the bacteriophage T4 single-stranded DNA binding protein (gp32) to ssDNA lattices at replication fork junctions.
Lee W, Gillies J, Jose D, Israels B, von Hippel P, Marcus A
Nucleic Acids Res. 2016; 44(22):10691-10710.
PMID: 27694621
PMC: 5159549.
DOI: 10.1093/nar/gkw863.
Force regulated dynamics of RPA on a DNA fork.
Kemmerich F, Daldrop P, Pinto C, Levikova M, Cejka P, Seidel R
Nucleic Acids Res. 2016; 44(12):5837-48.
PMID: 27016742
PMC: 4937307.
DOI: 10.1093/nar/gkw187.
-1 Programmed Ribosomal Frameshifting as a Force-Dependent Process.
Visscher K
Prog Mol Biol Transl Sci. 2016; 139:45-72.
PMID: 26970190
PMC: 7102820.
DOI: 10.1016/bs.pmbts.2015.11.003.
E. coli metabolic protein aldehyde-alcohol dehydrogenase-E binds to the ribosome: a unique moonlighting action revealed.
Shasmal M, Dey S, Shaikh T, Bhakta S, Sengupta J
Sci Rep. 2016; 6:19936.
PMID: 26822933
PMC: 4731797.
DOI: 10.1038/srep19936.
P(I) Release Limits the Intrinsic and RNA-Stimulated ATPase Cycles of DEAD-Box Protein 5 (Dbp5).
Wong E, Cao W, Voros J, Merchant M, Modis Y, Hackney D
J Mol Biol. 2016; 428(2 Pt B):492-508.
PMID: 26730886
PMC: 4744555.
DOI: 10.1016/j.jmb.2015.12.018.
Helicase processivity and not the unwinding velocity exhibits universal increase with force.
Pincus D, Chakrabarti S, Thirumalai D
Biophys J. 2015; 109(2):220-30.
PMID: 26200858
PMC: 4621497.
DOI: 10.1016/j.bpj.2015.05.020.
