Rashid S, Ali I, Sultana S, Zia Z, Elagan S
Heliyon. 2024; 10(23):e40659.
PMID: 39669132
PMC: 11636111.
DOI: 10.1016/j.heliyon.2024.e40659.
Friedhoff V, Lindner B, Falcke M
Biophys J. 2023; 122(13):2818-2831.
PMID: 37312455
PMC: 10398346.
DOI: 10.1016/j.bpj.2023.06.004.
Gebhardt T, Toure V, Waltemath D, Wolkenhauer O, Scharm M
PLoS One. 2022; 17(3):e0265735.
PMID: 35312734
PMC: 8936491.
DOI: 10.1371/journal.pone.0265735.
Turovsky E, Turovskaya M, Dynnik V
Int J Mol Sci. 2021; 22(10).
PMID: 34065973
PMC: 8150837.
DOI: 10.3390/ijms22105109.
Dhyani V, Gare S, Gupta R, Swain S, Venkatesh K, Giri L
Cell Signal. 2020; 74:109717.
PMID: 32711109
PMC: 7375278.
DOI: 10.1016/j.cellsig.2020.109717.
Effect of delay in transportation of extracellular glucose into cardiomyocytes under diabetic condition: a study through mathematical model.
Das P, Kumar A, Bairagi N, Chatterjee S
J Biol Phys. 2020; 46(3):253-281.
PMID: 32583238
PMC: 7441137.
DOI: 10.1007/s10867-020-09551-8.
Emergence of Mixed Mode Oscillations in Random Networks of Diverse Excitable Neurons: The Role of Neighbors and Electrical Coupling.
Ghosh S, Mondal A, Ji P, Mishra A, Dana S, Antonopoulos C
Front Comput Neurosci. 2020; 14:49.
PMID: 32581757
PMC: 7294985.
DOI: 10.3389/fncom.2020.00049.
IP-Dependent Ca Oscillations Switch into a Dual Oscillator Mechanism in the Presence of PLC-Linked Hormones.
Bartlett P, Cloete I, Sneyd J, Thomas A
iScience. 2020; 23(5):101062.
PMID: 32353764
PMC: 7191650.
DOI: 10.1016/j.isci.2020.101062.
Differential equation-based minimal model describing metabolic oscillations in biofilms.
Garde R, Ibrahim B, Kovacs A, Schuster S
R Soc Open Sci. 2020; 7(2):190810.
PMID: 32257302
PMC: 7062081.
DOI: 10.1098/rsos.190810.
Computational Analysis of Insulin-Glucagon Signalling Network: Implications of Bistability to Metabolic Homeostasis and Disease states.
Somvanshi P, Tomar M, Kareenhalli V
Sci Rep. 2019; 9(1):15298.
PMID: 31653897
PMC: 6814820.
DOI: 10.1038/s41598-019-50889-4.
A Neuromorphic Digital Circuit for Neuronal Information Encoding Using Astrocytic Calcium Oscillations.
Faramarzi F, Azad F, Amiri M, Linares-Barranco B
Front Neurosci. 2019; 13:998.
PMID: 31649494
PMC: 6794439.
DOI: 10.3389/fnins.2019.00998.
Mechanistic inferences on metabolic dysfunction in posttraumatic stress disorder from an integrated model and multiomic analysis: role of glucocorticoid receptor sensitivity.
Somvanshi P, Mellon S, Flory J, Abu-Amara D, Wolkowitz O, Yehuda R
Am J Physiol Endocrinol Metab. 2019; 317(5):E879-E898.
PMID: 31322414
PMC: 6879860.
DOI: 10.1152/ajpendo.00065.2019.
Evaluation of Parallel Tempering to Accelerate Bayesian Parameter Estimation in Systems Biology.
Gupta S, Hainsworth L, Hogg J, Lee R, Faeder J
Proc Euromicro Int Conf Parallel Distrib Netw Based Process. 2018; 2018:690-697.
PMID: 30175326
PMC: 6116909.
DOI: 10.1109/PDP2018.2018.00114.
Exploring the intrinsic behaviour of multisite phosphorylation systems as part of signalling pathways.
Suwanmajo T, Krishnan J
J R Soc Interface. 2018; 15(143).
PMID: 29950514
PMC: 6030633.
DOI: 10.1098/rsif.2018.0109.
Modeling and simulation of biological systems using SPICE language.
Madec M, Lallement C, Haiech J
PLoS One. 2017; 12(8):e0182385.
PMID: 28787027
PMC: 5546598.
DOI: 10.1371/journal.pone.0182385.
COPASI and its applications in biotechnology.
Bergmann F, Hoops S, Klahn B, Kummer U, Mendes P, Pahle J
J Biotechnol. 2017; 261:215-220.
PMID: 28655634
PMC: 5623632.
DOI: 10.1016/j.jbiotec.2017.06.1200.
The Effect of Gap Junctional Coupling on the Spatiotemporal Patterns of Ca2+ Signals and the Harmonization of Ca2+-Related Cellular Responses.
Dougoud M, Vinckenbosch L, Mazza C, Schwaller B, Pecze L
PLoS Comput Biol. 2016; 12(12):e1005295.
PMID: 28027293
PMC: 5226819.
DOI: 10.1371/journal.pcbi.1005295.
A G-protein subunit translocation embedded network motif underlies GPCR regulation of calcium oscillations.
Giri L, Patel A, Karunarathne W, Kalyanaraman V, Venkatesh K, Gautam N
Biophys J. 2014; 107(1):242-54.
PMID: 24988358
PMC: 4119271.
DOI: 10.1016/j.bpj.2014.05.020.
The structure of dynamic GPCR signaling networks.
ONeill P, Giri L, Karunarathne W, Patel A, Venkatesh K, Gautam N
Wiley Interdiscip Rev Syst Biol Med. 2014; 6(1):115-23.
PMID: 24741711
PMC: 4007319.
DOI: 10.1002/wsbm.1249.
Cell-type-specific modelling of intracellular calcium signalling: a urothelial cell model.
Appleby P, Shabir S, Southgate J, Walker D
J R Soc Interface. 2013; 10(86):20130487.
PMID: 23864504
PMC: 3730703.
DOI: 10.1098/rsif.2013.0487.