Crystal Structures of Homoserine Dehydrogenase Suggest a Novel Catalytic Mechanism for Oxidoreductases
Overview
Affiliations
The structure of the antifungal drug target homoserine dehydrogenase (HSD) was determined from Saccharomyces cerevisiae in apo and holo forms, and as a ternary complex with bound products, by X-ray diffraction. The three forms show that the enzyme is a dimer, with each monomer composed of three regions, the nucleotide-binding region, the dimerization region and the catalytic region. The dimerization and catalytic regions have novel folds, whereas the fold of the nucleotide-binding region is a variation on the Rossmann fold. The novel folds impose a novel composition and arrangement of active site residues when compared to all other currently known oxidoreductases. This observation, in conjunction with site-directed mutagenesis of active site residues and steady-state kinetic measurements, suggest that HSD exhibits a new variation on dehydrogenase chemistry.
Non-canonical chromatin-based functions for the threonine metabolic pathway.
Chik J, Su X, Klepin S, Raygoza J, Pillus L Sci Rep. 2024; 14(1):22629.
PMID: 39349514 PMC: 11442984. DOI: 10.1038/s41598-024-72394-z.
Barnawi H, Woodward L, Fava N, Roubakha M, Shaw S, Kubinec C J Biol Chem. 2021; 296:100352.
PMID: 33524389 PMC: 7949155. DOI: 10.1016/j.jbc.2021.100352.
Molecular and Enzymatic Features of Homoserine Dehydrogenase from .
Kim D, Nguyen Q, Ko G, Yang J J Microbiol Biotechnol. 2020; 30(12):1905-1911.
PMID: 33046675 PMC: 9728202. DOI: 10.4014/jmb.2004.04060.
System Approach for Building of Calcium-Binding Sites in Proteins.
Denesyuk A, Permyakov S, Johnson M, Denessiouk K, Permyakov E Biomolecules. 2020; 10(4).
PMID: 32290360 PMC: 7226230. DOI: 10.3390/biom10040588.
Protein Moonlighting Revealed by Noncatalytic Phenotypes of Yeast Enzymes.
Espinosa-Cantu A, Ascencio D, Herrera-Basurto S, Xu J, Roguev A, Krogan N Genetics. 2017; 208(1):419-431.
PMID: 29127264 PMC: 5753873. DOI: 10.1534/genetics.117.300377.