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GenBank

Overview
Specialty Biochemistry
Date 1999 Dec 11
PMID 10592170
Citations 288
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Abstract

The GenBank((R))sequence database incorporates publicly available DNA sequences of >55 000 different organisms, primarily through direct submission of sequence data from individual laboratories and large-scale sequencing projects. Most submissions are made using the BankIt (Web) or Sequin programs and accession numbers are assigned by GenBank staff upon receipt. Data exchange with the EMBL Data Library and the DNA Data Bank of Japan helps ensure comprehensive worldwide coverage. GenBank data is accessible through NCBI's integrated retrieval system, Entrez, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping and protein structure information, plus the biomedical literature via PubMed. Sequence similarity searching is provided by the BLAST family of programs. Complete bimonthly releases and daily updates of the GenBank database are available by FTP. NCBI also offers a wide range of WWW retrieval and analysis services based on GenBank data. The GenBank database and related resources are freely accessible via the NCBI home page at http://www.ncbi.nlm.nih.gov

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References
1.
Wheeler D, Chappey C, Lash A, Leipe D, Madden T, Schuler G . Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 1999; 28(1):10-4. PMC: 102437. DOI: 10.1093/nar/28.1.10. View

2.
Wang Y, Addess K, Geer L, Madej T, Zimmerman D, BRYANT S . MMDB: 3D structure data in Entrez. Nucleic Acids Res. 1999; 28(1):243-5. PMC: 102448. DOI: 10.1093/nar/28.1.243. View

3.
Boguski M, Lowe T, Tolstoshev C . dbEST--database for "expressed sequence tags". Nat Genet. 1993; 4(4):332-3. DOI: 10.1038/ng0893-332. View

4.
Smith M, Holmsen A, Wei Y, Peterson M, Evans G . Genomic sequence sampling: a strategy for high resolution sequence-based physical mapping of complex genomes. Nat Genet. 1994; 7(1):40-7. DOI: 10.1038/ng0594-40. View

5.
Hudson T, Stein L, Gerety S, Ma J, Castle A, Silva J . An STS-based map of the human genome. Science. 1995; 270(5244):1945-54. DOI: 10.1126/science.270.5244.1945. View