» Articles » PMID: 10516001

Nonreplicative RNA Recombination in Poliovirus

Overview
Journal J Virol
Date 1999 Oct 9
PMID 10516001
Citations 62
Authors
Affiliations
Soon will be listed here.
Abstract

Current models of recombination between viral RNAs are based on replicative template-switch mechanisms. The existence of nonreplicative RNA recombination in poliovirus is demonstrated in the present study by the rescue of viable viruses after cotransfections with different pairs of genomic RNA fragments with suppressed translatable and replicating capacities. Approximately 100 distinct recombinant genomes have been identified. The majority of crossovers occurred between nonhomologous segments of the partners and might have resulted from transesterification reactions, not necessarily involving an enzymatic activity. Some of the crossover loci are clustered. The origin of some of these "hot spots" could be explained by invoking structures similar to known ribozymes. A significant proportion of recombinant RNAs contained the entire 5' partner, if its 3' end was oxidized or phosphorylated prior to being mixed with the 3' partner. All of these observations are consistent with a mechanism that involves intermediary formation of the 2',3'-cyclic phosphate and 5'-hydroxyl termini. It is proposed that nonreplicative RNA recombination may contribute to evolutionarily significant RNA rearrangements.

Citing Articles

A review of the recombination events, mechanisms and consequences of Coxsackievirus A6.

Wang Z, Wen H Infect Med (Beijing). 2024; 3(2):100115.

PMID: 38974347 PMC: 11225671. DOI: 10.1016/j.imj.2024.100115.


Existence and significance of viral nonreplicative RNA recombination.

Agol V PLoS Biol. 2023; 21(7):e3002216.

PMID: 37490454 PMC: 10368251. DOI: 10.1371/journal.pbio.3002216.


Patterns and Temporal Dynamics of Natural Recombination in Noroviruses.

Vakulenko Y, Orlov A, Lukashev A Viruses. 2023; 15(2).

PMID: 36851586 PMC: 9961210. DOI: 10.3390/v15020372.


Correlated substitutions reveal SARS-like coronaviruses recombine frequently with a diverse set of structured gene pools.

Preska Steinberg A, Silander O, Kussell E Proc Natl Acad Sci U S A. 2023; 120(5):e2206945119.

PMID: 36693089 PMC: 9945976. DOI: 10.1073/pnas.2206945119.


The enterovirus genome can be translated in an IRES-independent manner that requires the initiation factors eIF2A/eIF2D.

Kim H, Aponte-Diaz D, Sotoudegan M, Shengjuler D, Arnold J, Cameron C PLoS Biol. 2023; 21(1):e3001693.

PMID: 36689548 PMC: 9894558. DOI: 10.1371/journal.pbio.3001693.


References
1.
Romanova L, Blinov V, Tolskaya E, Viktorova E, Kolesnikova M, Guseva E . The primary structure of crossover regions of intertypic poliovirus recombinants: a model of recombination between RNA genomes. Virology. 1986; 155(1):202-13. DOI: 10.1016/0042-6822(86)90180-7. View

2.
Kirkegaard K, Baltimore D . The mechanism of RNA recombination in poliovirus. Cell. 1986; 47(3):433-43. PMC: 7133339. DOI: 10.1016/0092-8674(86)90600-8. View

3.
Pilipenko E, Gmyl A, MASLOVA S, Khitrina E, Agol V . Attenuation of Theiler's murine encephalomyelitis virus by modifications of the oligopyrimidine/AUG tandem, a host-dependent translational cis element. J Virol. 1995; 69(2):864-70. PMC: 188653. DOI: 10.1128/JVI.69.2.864-870.1995. View

4.
Dabrowski M, Wadzack J, Nierhaus K . Self-coded 3'-extension of run-off transcripts produces aberrant products during in vitro transcription with T7 RNA polymerase. J Biol Chem. 1995; 270(11):6298-307. DOI: 10.1074/jbc.270.11.6298. View

5.
Pilipenko E, Gmyl A, Agol V . A model for rearrangements in RNA genomes. Nucleic Acids Res. 1995; 23(11):1870-5. PMC: 306956. DOI: 10.1093/nar/23.11.1870. View